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SRX033257: Whole Exome sequencing for the 1000 Genomes Project
120 ILLUMINA (Illumina HiSeq 2000) runs: 96.4M spots, 13.9G bases, 7.6Gb downloads

Design: Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection
Submitted by: Broad Institute (BI)
Study: Exome sequencing of (CLM) Colombia from Medellin, Colombia HapMap population
PRJNA60133 • SRP004070 • All experiments • All runs
Samples: pool of 15 samples • Homo sapiens
Library:
Name: Solexa-42316
Instrument: Illumina HiSeq 2000
Strategy: WXS
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Spot descriptor:
1  forward barcode77  reverse

Experiment attributes: (show all 6 attributes...) (hide...)
EXPECTED_BASECALL_TABLE: match_edge="full" max_mismatch="1" min_match="7" r (show full text...)(hide...)
match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_934" member_name="tagged_934_TTAATCAG" TTAATCAG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_534" member_name="tagged_534_CTGCGGAT" CTGCGGAT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_635" member_name="tagged_635_GCAGCCGT" GCAGCCGT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_293" member_name="tagged_293_ATTCTAGG" ATTCTAGG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_289" member_name="tagged_289_ATTATGTT" ATTATGTT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_800" member_name="tagged_800_TACTTAGC" TACTTAGC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_220" member_name="tagged_220_AGGTCGCA" AGGTCGCA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_924" member_name="tagged_924_TGTAATCA" TGTAATCA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_422" member_name="tagged_422_CCTACCAT" CCTACCAT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_747" member_name="tagged_747_GTCCACAG" GTCCACAG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_288" member_name="tagged_288_ATTATCAA" ATTATCAA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_938" member_name="tagged_938_TTACGCAC" TTACGCAC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_509" member_name="tagged_509_CTATGCGT" CTATGCGT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_754" member_name="tagged_754_GTCTGATG" GTCTGATG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_498" member_name="tagged_498_CGTTACCA" CGTTACCA
5 BI attributes: (show...)(hide...)
BI GSSR sample IDs: 65652.0, 65653.0, 65654.0, 65655.0, 65656.0, 65657.0, 65658.0, 65659.0, 65660.0, 65661.0, 65662.0, 65663.0, 65664.0, 65665.0, 65666.0
BI GSSR sample LSIDs: broadinstitute.org:bsp.prod.sample:1D9W7, broadinstitute.org:bsp.prod.sample:1D9W8, broadinstitute.org:bsp.prod.sample:1D9W9, broadinstitute.org:bsp.prod.sample:1D9WA, broadinstitute.org:bsp.prod.sample:1D9WB, broadinstitute.org:bsp.prod.sample:1D9WC, broadinstitute.org:bsp.prod.sample:1D9WD, broadinstitute.org:bsp.prod.sample:1D9WE, broadinstitute.org:bsp.prod.sample:1D9WF, broadinstitute.org:bsp.prod.sample:1D9WG, broadinstitute.org:bsp.prod.sample:1D9WH, broadinstitute.org:bsp.prod.sample:1D9WI, broadinstitute.org:bsp.prod.sample:1D9WJ, broadinstitute.org:bsp.prod.sample:1D9WK, broadinstitute.org:bsp.prod.sample:1D9WL
BI project name: C460
BI target set: whole_exome_agilent_1.1_refseq_plus_3_boosters
BI work request ID: 23276
Runs: 120 runs, 96.4M spots, 13.9G bases, 7.6Gb
Run# of Spots# of BasesSizePublished
SRR079942723,828104.2M57.4Mb2010-12-14
SRR079943728,723104.9M58.9Mb2010-12-14
SRR079945815,474117.4M64.8Mb2010-12-14
SRR079950686,95298.9M55.4Mb2010-12-14
SRR079973745,914107.4M59.4Mb2010-12-14
SRR079982764,558110.1M61.5Mb2010-12-14
SRR079989781,381112.5M62.9Mb2010-12-14
SRR079993779,016112.2M62.5Mb2010-12-14
SRR079998924,609133.1M75.8Mb2010-12-14
SRR080007708,868102.1M56.5Mb2010-12-14
SRR080011755,459108.8M60.3Mb2010-12-14
SRR080012761,694109.7M61.1Mb2010-12-14
SRR080014861,354124M69.1Mb2010-12-14
SRR080016936,432134.8M76.5Mb2010-12-14
SRR080021818,750117.9M65.6Mb2010-12-14
There are 105 omitted runs. See all runs in Run Selector.

#Member# of Spots# of Bases
1SRS074262 : tagged_293_ATTCTAGG6.9M995M
2SRS074263 : tagged_747_GTCCACAG5.9M845.4M
3SRS074271 : tagged_938_TTACGCAC6.2M894.8M
4SRS074283 : tagged_220_AGGTCGCA7.3M1.1G
5SRS074284 : tagged_924_TGTAATCA6M860M
6SRS074286 : tagged_934_TTAATCAG5M724M
7SRS074287 : tagged_498_CGTTACCA6.5M940.6M
8SRS074292 : tagged_800_TACTTAGC6.4M919.3M
9SRS074293 : tagged_534_CTGCGGAT6.6M943.9M
10SRS074295 : tagged_422_CCTACCAT6.8M976.1M
11SRS074296 : tagged_289_ATTATGTT6.3M907.8M
12SRS074298 : tagged_754_GTCTGATG5.7M825.7M
13SRS074299 : tagged_288_ATTATCAA6.1M873.3M
14SRS074301 : tagged_509_CTATGCGT6.7M967M
15SRS074302 : tagged_635_GCAGCCGT8M1.1G
16 : defaultn/an/a

ID:
40201

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